Screening of Metabolites Produced by Pathogenic Escherichia coli and Evaluation of its Antimicrobial Activity
Abstract
Background: First, the term ‘metabolic processes’ refers to all the biochemical reactions which occurs in a given organism, and this is relevant for our aims and objectives as stated below: Substrate oxidations and dissimilation reaction is the chemical variation in bacterial metabolism that energy bacteria employ in the production of energy. Bacterial metabolites play basic roles in human biochemistry; they constitute an unexploited reservoir of drugs effective against a wide spectrum of diseases. In this work, the bioactive chemical compounds produced by Escherichia coli when synthesizing BCs were important for assessing the efficacy of the synthesized BCs against different bacteria.
Methods: The primary and secondary metabolites produced and referred to as the bioactive chemical compound were analyzed using gas chromatography-mass spectrometry (GC-MS) analysis. The antibacterial activity in vitro of the ethanolic extract of Escherichia coli was also determined.In E. coli GC-MS analysis the following compounds were found: objectives. It is worth to mention that substrate oxidations and dissimilation reactions are chemically diverse aspects of bacterial metabolism as a means of producing energy. Metabolites created by bacteria are essential for human survival and are also considered to be excellent drug candidates for a large number of diseases. The researchers sought to identify the effectiveness of bioactive chemical compounds that are secreted from Escherichia coli on various bacteria types.
Methods: The bioactive chemical components also referred to as secondary metabolites were determined using gas chromatography-mass spectrometry (GC-MS) practices. The above ethanolic extract of Escherichia coli was also assessed its efficacy profiles by the in vitro antibacterial assay.
Result: Following are the list of compounds: tert-Butyl 12-aminododecanoate, 1,12-Diaminododecane, Ethylidenehydroxylamine, 5,6-Diamino-2,3-dicyanopyrazine, 1 -methylpiperidine-3-Mannose, D-Ornithine, 5-Hydroxy-L-tryptophan, Glycerophosphocholine. This research compared the efficacy of two common antibiotics, RF-Rifampicin and SF-Sulfonamide, with an ethanolic extract of Escherichia coli against five different bacteria: , Enterococcus faecalis (14.54±0.11; 23.99±0.23; 17.97±0.20), Bacillus subtilis (15.12±0.21; 25.27±0.26; 19.00±0.2), Streptococcus pyogen Comparing the average activity against all the tested microorganisms, the metabolites of Escherichia coli showed highest activity against Streptococcus pyogenes (15.12±0.21).
Full text article
References
Surya, M.; Thiruvudainambi, S.; Ebenezar, E.G.; Vanniarajan, C.; Kumutha, K.; Vellaikumar, S. GC-MS Analysis of antimicrobial compounds produced by Bacillus spp. against rice sheath rot pathogen Sarocladium oryzae. J. Entomol. Zool. Stud. 2020, 8, 1417–1423.
Balcázar, J.L.; Rojas-Luna, T. Inhibitory activity of probiotic Bacillus subtilis UTM 126 against Vibrio species confers protection against vibriosis in juvenile shrimp (Litopenaeus vannamei). Curr. Microbiol. 2007, 55, 409–412.
Radhakrishnan, R.; Lee, I.J. Gibberellins producing Bacillus methylotrophicus KE2 supports plant growth and enhances nutritional metabolites and food values of lettuce. Plant Physiol. Biochem. 2016, 109, 181–189.
Miljakovi´c, D.; Marincovic, J.; Baleševi´c-Tubi´c, S. The Significance of Bacillus spp. in Disease Suppression and Growth Promotion of Field and Vegetable Crops. Microorganisms 2020, 8, 1037.
Sabu, R.; Radhakrishnan, E.K. Bioprospecting of endophytic bacteria from zingiber officinale with antibacterial activities. Int. J. Curr. Microbiol. Appl. Sci. 2016, 5, 462–467.
Yilmaz, M.; Soran, H.; Beyatli, Y. Antimicrobial Activities of Some Bacillus spp. Strains Isolated from the Soil. Microbiol. Res. 2006, 161, 127–131.
Beiranvand, M.; Amin, M.; Hashemi-Shahraki, A.; Romani, B.; Yaghoubi, S.; Sadeghi, P. Antimicrobial activity of endophytic bacterial populations isolated from medical plants of Iran. Iran. J. Microbiol. 2017, 9, 11–18
González-Domínguez R, Sayago A, Fernández-Recamales Á. Direct infusion mass spectrometry for metabolomic phenotyping of diseases. Bioanalysis. 2017;9(1):131–148.
Izquierdo-García JL, Nin N, Ruíz-Cabello J, et al. A metabolomic approach for diagnosis of experimental sepsis. Intensive Care Med. 2011;37 (12):2023–2032.
Parent BA, Seaton M, Sood RF, et al. Use of metabolomics to trend recovery and therapy after injury in critically ill trauma patients. JAMA Surg. 2016;151(7):e160853.
Mickiewicz B, Vogel HJ, Wong HR, et al. Metabolomics as a novel approach for early diagnosis of pediatric septic shock and its mortality. Am J Respir Crit Care Med. 2013;187(9):967–976.
Jaurila H, Koivukangas V, Koskela M, et al. 1 H NMR based metabolomics in human sepsis and healthy serum. Metabolites. 2020;10(2):70.
Liu Z, Triba MN, Amathieu R, et al. Nuclear magnetic resonance-based serum metabolomic analysis reveals different disease evolution profiles between septic shock survivors and non-survivors. Crit Care. 2019;23(1):169.
Silas Y, Singer E, Das K, et al. A combination of Class-I fumarases and metabolites (α-ketoglutarate and fumarate) signal the DNA damage response in Escherichia coli. Proc Natl Acad Sci U S A. 2021;118(23):e2026595118
Mora, I., Cabrefiga, J., and Montesinos, E. (2015). Cyclic lipopeptide biosynthetic genes and products, and inhibitory activity of plant-associated Bacillus against phytopathogenic bacteria. PLoS One 10, e0127738.
Munjal, V., Nadakkakath, A. V., Sheoran, N., Kundu, A., Venugopal, V., Subaharan, K., et al. (2016). Genotyping and identification of broad spectrum antimicrobial volatiles in black pepper root endophytic biocontrol agent, Bacillus megaterium BP17. Biol. Control 92, 66–76. 2015.
Nas, F., Aissaoui, N., Mahjoubi, M., Mosbah, A., Arab, M., Abdelwahed, S., et al. (2021). A comparative GC–MS analysis of bioactive secondary metabolites produced by halotolerant Bacillus spp. isolated from the Great Sebkha of Oran. Int. Microbiol. 24, 455–470.
Raudvere, U., Kolberg, L., Kuzmin, I., Arak, T., Adler, P., Peterson, H., et al. (2019). g: profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update). Nucleic acids Res. 47, W191–W198.
Shao, Y., Wang, X.-y., Qiu, X., Niu, L.-l., and Ma, Z.-l. (2021). Isolation and purification of a new Bacillus subtilis Strain from deer dung with anti-microbial and anti-cancer activities. Curr. Med. Sci. 41, 832–840.
Valli, S., Suvathi, S. S., Aysha, O., Nirmala, P., Vinoth, K. P., and Reena, A. (2012). Antimicrobial potential of Actinomycetes species isolated from marine environment. Asian Pac. J. Trop. Biomed. 2, 469–473.
Zhou, M., Liu, F., Yang, X., Jin, J., Dong, X., Zeng, K.-W., et al. (2018). Bacillibactin and bacillomycin analogues with cytotoxicities against human cancer cell lines from marine Bacillus sp. PKU-MA00093 and PKU-MA00092. Mar. Drugs 16, 22.
Bonifait L, Marquis A, Genovese S, Epifano F, Grenier D. 2012.
Synthesis and antimicrobial activity of geranyloxy- and farnesyloxy-
acetophenone derivatives against oral pathogens. Fitoterapia 83 (6):
-999.
Devi S, Kiesewalter HT, Kovács R, Frisvad JC, Weber T, Larsen TO,
Kovács ÁT, Ding L. 2019. Depiction of secondary metabolites and
antifungal activity of Bacillus velezensis DTU001. Synth Syst
Biotechnol 4 (3): 142-149.
Kumar S, Stecher G, Tamura K. 2016. MEGA7: Molecular evolutionary
genetics analysis version 7.0 for bigger datasets. Mol Biol Evol 33
(7): 1870-1874.
Lucena-Aguilar G, Sánchez-López AM, Barberán-Aceituno C, Carrillo-
Ávila JA, López-Guerrero JA, Aguilar-Quesada R. 2016. DNA source
selection for downstream applications based on DNA quality
indicators analysis. Biopreserv Biobank 14 (4): 264-270.
Miethke M, Pieroni M, Weber T, Brönstrup M, Hammann P, Halby L,
Arimondo PB, Glaser P, Aigle B, Bode HB, et al. 2021. Towards the
sustainable discovery and development of new antibiotics. Nat Rev
Chem 5 (10): 726-749.
Nas F, Aissaoui N, Mahjoubi M, Mosbah A, Arab M, Abdelwahed S,
Khrouf R, Masmoudi AS, Cherif A, Klouche-Khelil N. 2021. A
comparative GC-MS analysis of bioactive secondary metabolites
produced by halotolerant Bacillus spp. isolated from the Great Sebkha
of Oran. Intl Microbiol 24 (3): 455-470.
de Oliveira JA, Williams DE, Andersen RJ, Sarragiotto MH, Baldoqui
DC. 2020. Pumilacidins A-E from sediment-derived bacterium
Bacillus sp. 4040 and their antimicrobial activity evaluation. J Braz
Chem Soc 31 (2): 357-363.
Ong JFM, Goh HC, Lim SC, Pang LM, Chin JSF, Tan KS, Liang ZX,
Yang L, Glukhov E, Gerwick WH, Tan LT. 2019. Integrated genomic
and metabolomic approach to the discovery of potential anti-quorum
sensing natural products from microbes associated with marine
samples from Singapore. Mar Drugs 17 (72): 1-15.
Pham JV, Yilma MA, Feliz A, Majid MT, Maffetone N, Walker JR, Kim
E, Cho HJ, Reynolds JM, Song MC, Park SR. 2019. A review of the
microbial production of bioactive natural products and biologics.
Front Microbiol 10: 1404.
Authors
Copyright (c) 2024 Journal of Current Medical Research and Opinion
This work is licensed under a Creative Commons Attribution 4.0 International License.